Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | KR76_RS20915 | Not Available | Negative | 4237593 - 4238147 | 20504.6 |
| s9 family peptidase | KR76_RS20920 | Not Available | Positive | 4238309 - 4240603 | 83751.7 |
| hnh endonuclease signature motif containing protein | KR76_RS20925 | Not Available | Negative | 4240698 - 4241939 | 45289.3 |
| pucr family transcriptional regulator | KR76_RS20930 | Not Available | Negative | 4242018 - 4243658 | 57907.1 |
| gnat family n-acetyltransferase | KR76_RS20935 | Not Available | Negative | 4243736 - 4244617 | 31782.6 |
| abc transporter substrate-binding protein | KR76_RS20940 | Not Available | Positive | 4244793 - 4246664 | 66348.7 |
| coce/nond family hydrolase | KR76_RS20945 | Not Available | Negative | 4246701 - 4248554 | 67181.0 |
| dipeptidase | KR76_RS20950 | Not Available | Negative | 4248563 - 4249534 | 34498.7 |
| ornithine cyclodeaminase family protein | KR76_RS20955 | Not Available | Negative | 4249549 - 4250541 | 33594.1 |
| nad(p)/fad-dependent oxidoreductase | KR76_RS20960 | Not Available | Negative | 4250538 - 4251782 | 42260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
