Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse/argo family amino acid transporter | KR76_RS20875 | Not Available | Positive | 4229617 - 4230237 | 21382.6 |
| s9 family peptidase | KR76_RS20880 | Not Available | Negative | 4230240 - 4231070 | 27698.0 |
| alkaline phosphatase | KR76_RS20885 | Not Available | Positive | 4231225 - 4232979 | 59244.5 |
| hypothetical protein | KR76_RS20890 | Not Available | Positive | 4233066 - 4233614 | 18550.7 |
| hypothetical protein | KR76_RS20895 | Not Available | Negative | 4233604 - 4234263 | 22916.2 |
| hypothetical protein | KR76_RS29745 | Not Available | Negative | 4234282 - 4234464 | 6792.24 |
| mfs transporter | KR76_RS30980 | Not Available | Negative | 4234687 - 4235300 | 21664.3 |
| hypothetical protein | KR76_RS20905 | Not Available | Negative | 4235406 - 4236092 | 23722.5 |
| matrixin family metalloprotease | KR76_RS29160 | Not Available | Negative | 4236079 - 4236684 | 21748.6 |
| gnat family n-acetyltransferase | KR76_RS20910 | Not Available | Negative | 4237012 - 4237566 | 20892.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
