Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triacylglycerol lipase | KR76_RS20770 | Not Available | Negative | 4209716 - 4210570 | 29794.7 |
| uma2 family endonuclease | KR76_RS20775 | Not Available | Negative | 4210601 - 4211182 | 21443.7 |
| vanw family protein | KR76_RS20780 | Not Available | Negative | 4211298 - 4213082 | 63408.4 |
| hypothetical protein | KR76_RS28465 | Not Available | Negative | 4213093 - 4213446 | 11805.6 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | KR76_RS20790 | Not Available | Negative | 4213463 - 4214386 | 33300.8 |
| hypothetical protein | KR76_RS20795 | Not Available | Positive | 4214412 - 4215422 | 35403.5 |
| hypothetical protein | KR76_RS20800 | Not Available | Negative | 4215406 - 4215696 | 10562.3 |
| hypothetical protein | KR76_RS20805 | Not Available | Positive | 4215739 - 4216785 | 38371.6 |
| glycine c-acetyltransferase | KR76_RS20810 | Not Available | Negative | 4216769 - 4217956 | 42649.6 |
| l-threonine 3-dehydrogenase | KR76_RS20815 | Not Available | Negative | 4217956 - 4218999 | 36859.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
