Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc1 kinase family protein | KR76_RS20670 | Not Available | Positive | 4192745 - 4194082 | 48677.4 |
| dinb family protein | KR76_RS20675 | Not Available | Negative | 4194101 - 4194610 | 18979.5 |
| voc family protein | KR76_RS20680 | Not Available | Negative | 4194607 - 4195344 | 26617.1 |
| pyridoxamine 5'-phosphate oxidase family protein | KR76_RS20685 | Not Available | Negative | 4195341 - 4195721 | 12773.0 |
| tsup family transporter | KR76_RS20690 | Not Available | Negative | 4195738 - 4196517 | 26502.1 |
| hypothetical protein | KR76_RS20695 | Not Available | Negative | 4196530 - 4197039 | 17812.0 |
| alpha/beta hydrolase | KR76_RS20700 | Not Available | Negative | 4197036 - 4198832 | 62386.2 |
| hypothetical protein | KR76_RS29735 | Not Available | Negative | 4198840 - 4199166 | 11800.7 |
| hypothetical protein | KR76_RS20710 | Not Available | Negative | 4199163 - 4199708 | 18980.5 |
| vwa domain-containing protein | KR76_RS20715 | Not Available | Negative | 4199811 - 4201829 | 74026.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
