Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | KR76_RS20470 | Not Available | Positive | 4161846 - 4162412 | 20968.3 |
| heme oxygenase (biliverdin-producing) | KR76_RS20475 | Not Available | Positive | 4162546 - 4163229 | 24372.7 |
| srpbcc family protein | KR76_RS20480 | Not Available | Negative | 4163214 - 4163660 | 16272.7 |
| hypothetical protein | KR76_RS20485 | Not Available | Positive | 4163670 - 4164020 | 12961.5 |
| merr family transcriptional regulator | KR76_RS20490 | Not Available | Positive | 4164061 - 4164462 | 15037.0 |
| aldo/keto reductase | KR76_RS20495 | Not Available | Positive | 4164497 - 4165489 | 35074.4 |
| phospho-sugar mutase | KR76_RS20500 | Not Available | Positive | 4165519 - 4167189 | 56950.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | KR76_RS20505 | Not Available | Negative | 4167186 - 4167740 | 18880.8 |
| hypothetical protein | KR76_RS20510 | Not Available | Negative | 4167771 - 4168334 | 20473.9 |
| deoxyribose-phosphate aldolase | KR76_RS20515 | Not Available | Positive | 4168359 - 4169342 | 34662.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
