Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2332 domain-containing protein | KR76_RS20365 | Not Available | Positive | 4136766 - 4137746 | 34789.4 |
| uma2 family endonuclease | KR76_RS20370 | Not Available | Positive | 4137835 - 4138416 | 21101.5 |
| abc transporter permease | KR76_RS20375 | Not Available | Negative | 4138413 - 4139228 | 28391.5 |
| abc transporter atp-binding protein | KR76_RS20380 | Not Available | Negative | 4139225 - 4140226 | 35066.5 |
| yafy family protein | KR76_RS20385 | Not Available | Positive | 4140290 - 4141234 | 34796.7 |
| n-acyl-d-amino-acid deacylase family protein | KR76_RS20390 | Not Available | Negative | 4141224 - 4142975 | 63654.0 |
| amp-binding protein | KR76_RS20395 | Not Available | Negative | 4142972 - 4144561 | 56212.3 |
| alpha/beta fold hydrolase | KR76_RS20400 | Not Available | Negative | 4144554 - 4145465 | 31192.1 |
| tetr/acrr family transcriptional regulator | KR76_RS20405 | Not Available | Negative | 4145462 - 4146094 | 23496.6 |
| flavin-containing monooxygenase | KR76_RS20410 | Not Available | Negative | 4146091 - 4147419 | 49877.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
