Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4118993 - 4119066 | Not Available |
| pp2c family protein-serine/threonine phosphatase | KR76_RS20270 | Not Available | Negative | 4119144 - 4120226 | 38224.6 |
| fpg/nei family dna glycosylase | KR76_RS20275 | Not Available | Negative | 4120190 - 4121026 | 30553.7 |
| ribose-5-phosphate isomerase | KR76_RS20280 | Not Available | Negative | 4121026 - 4121532 | 18211.3 |
| nad(p)h-quinone dehydrogenase | KR76_RS20285 | Not Available | Negative | 4121565 - 4122932 | 46847.0 |
| abc transporter substrate-binding protein | KR76_RS20290 | Not Available | Positive | 4122978 - 4123847 | 30952.4 |
| amino acid abc transporter permease | KR76_RS20295 | Not Available | Positive | 4123844 - 4124722 | 31696.1 |
| amino acid abc transporter atp-binding protein | KR76_RS20300 | Not Available | Positive | 4124722 - 4125486 | 27513.3 |
| dmt family transporter | KR76_RS20305 | Not Available | Positive | 4125483 - 4126478 | 32450.0 |
| hypothetical protein | KR76_RS20310 | Not Available | Negative | 4126461 - 4126979 | 18697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
