Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | KR76_RS20215 | Not Available | Negative | 4111049 - 4111654 | 22229.6 |
| atp-dependent clp protease proteolytic subunit | KR76_RS20220 | Not Available | Negative | 4111657 - 4112301 | 22963.4 |
| response regulator | KR76_RS20225 | Not Available | Negative | 4112382 - 4112999 | 21232.8 |
| sensor histidine kinase | KR76_RS28440 | Not Available | Negative | 4113011 - 4114141 | 38819.5 |
| cpbp family intramembrane glutamic endopeptidase | KR76_RS20235 | Not Available | Positive | 4114273 - 4115166 | 31309.8 |
| srpbcc family protein | KR76_RS20240 | Not Available | Negative | 4115144 - 4115623 | 17279.7 |
| hypothetical protein | KR76_RS20245 | Not Available | Negative | 4115650 - 4115982 | 11017.7 |
| lipase family alpha/beta hydrolase | KR76_RS20250 | Not Available | Negative | 4116030 - 4117208 | 40976.5 |
| trigger factor | KR76_RS20255 | Not Available | Negative | 4117449 - 4118828 | 50482.6 |
| Trna-pro | Not Available | Not Available | Positive | 4118895 - 4118967 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
