Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | KR76_RS20165 | Not Available | Positive | 4099550 - 4100476 | 32347.6 |
| aurf n-oxygenase family protein | KR76_RS20170 | Not Available | Negative | 4100466 - 4101362 | 33773.8 |
| tetr/acrr family transcriptional regulator | KR76_RS20175 | Not Available | Positive | 4101441 - 4102121 | 23910.4 |
| duf4873 domain-containing protein | KR76_RS20180 | Not Available | Positive | 4102118 - 4102405 | 10201.8 |
| helix-turn-helix domain-containing protein | KR76_RS20185 | Not Available | Negative | 4102481 - 4103011 | 18386.9 |
| benzoate/h(+) symporter bene family transporter | KR76_RS20190 | Not Available | Positive | 4103076 - 4104281 | 39721.2 |
| spoiid/lytb domain-containing protein | KR76_RS20195 | Not Available | Negative | 4104232 - 4105395 | 40242.0 |
| valine--trna ligase | KR76_RS20200 | Not Available | Positive | 4105454 - 4108078 | 96544.2 |
| glycosyltransferase family 61 protein | KR76_RS20205 | Not Available | Negative | 4108080 - 4109642 | 56892.1 |
| atp-dependent clp protease atp-binding subunit clpx | KR76_RS20210 | Not Available | Negative | 4109654 - 4110934 | 46194.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
