Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | KR76_RS20065 | Not Available | Negative | 4080512 - 4081843 | 47679.2 |
| fad-dependent oxidoreductase | KR76_RS20070 | Not Available | Negative | 4081911 - 4083332 | 49751.8 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS20075 | Not Available | Negative | 4083329 - 4084108 | 26522.4 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS20080 | Not Available | Negative | 4084101 - 4084916 | 28287.9 |
| nuclear transport factor 2 family protein | KR76_RS20085 | Not Available | Negative | 4084913 - 4085407 | 17801.9 |
| iclr family transcriptional regulator | KR76_RS20090 | Not Available | Positive | 4085546 - 4086244 | 24740.6 |
| maf family protein | KR76_RS20095 | Not Available | Positive | 4086279 - 4086878 | 20894.8 |
| hypothetical protein | KR76_RS28435 | Not Available | Positive | 4087551 - 4087943 | 12864.3 |
| acyl-coa dehydrogenase family protein | KR76_RS20105 | Not Available | Negative | 4087909 - 4089108 | 42851.0 |
| hypothetical protein | KR76_RS20110 | Not Available | Negative | 4089218 - 4089670 | 15218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
