Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf885 domain-containing protein | KR76_RS20015 | Not Available | Positive | 4069713 - 4071383 | 61363.4 |
| dna glycosylase alkz-like family protein | KR76_RS20020 | Not Available | Positive | 4071400 - 4072446 | 38215.2 |
| hnh endonuclease signature motif containing protein | KR76_RS20025 | Not Available | Positive | 4072494 - 4073774 | 46840.2 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS20030 | Not Available | Negative | 4073848 - 4074771 | 32310.7 |
| hypothetical protein | KR76_RS20035 | Not Available | Negative | 4074852 - 4075268 | 14827.5 |
| hypothetical protein | KR76_RS20040 | Not Available | Negative | 4075288 - 4076382 | 37834.0 |
| homogentisate 1,2-dioxygenase | KR76_RS20045 | Not Available | Negative | 4076418 - 4077605 | 43813.3 |
| hypothetical protein | KR76_RS20050 | Not Available | Positive | 4077689 - 4078507 | 27190.3 |
| fumarylacetoacetase | KR76_RS20055 | Not Available | Positive | 4078533 - 4079759 | 43960.8 |
| iclr family transcriptional regulator | KR76_RS20060 | Not Available | Positive | 4079770 - 4080435 | 22830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
