Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | KR76_RS19965 | Not Available | Negative | 4061118 - 4061618 | 16837.7 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | KR76_RS19970 | Not Available | Negative | 4061640 - 4062827 | 42117.2 |
| winged helix-turn-helix domain-containing protein | KR76_RS19975 | Not Available | Negative | 4062855 - 4063181 | 12388.9 |
| adenylate/guanylate cyclase domain-containing protein | KR76_RS19980 | Not Available | Negative | 4063275 - 4064195 | 33162.8 |
| ph domain-containing protein | KR76_RS19985 | Not Available | Negative | 4064188 - 4064709 | 19447.1 |
| biotin--[acetyl-coa-carboxylase] ligase | KR76_RS19990 | Not Available | Negative | 4064755 - 4065519 | 26660.6 |
| acyl-coa carboxylase subunit beta | KR76_RS19995 | Not Available | Positive | 4065650 - 4067263 | 58147.1 |
| acyl-coa carboxylase subunit epsilon | KR76_RS20000 | Not Available | Positive | 4067260 - 4067481 | 7469.84 |
| epoxide hydrolase family protein | KR76_RS20005 | Not Available | Negative | 4067533 - 4068645 | 40945.8 |
| helix-turn-helix transcriptional regulator | KR76_RS20010 | Not Available | Positive | 4068700 - 4069716 | 37020.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
