Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpxtg cell wall anchor domain-containing protein | KR76_RS19915 | Not Available | Negative | 4051710 - 4052276 | 19062.7 |
| class e sortase | KR76_RS19920 | Not Available | Negative | 4052357 - 4053121 | 27621.4 |
| hypothetical protein | KR76_RS19925 | Not Available | Negative | 4053185 - 4053697 | 17706.4 |
| hypothetical protein | KR76_RS19930 | Not Available | Negative | 4053893 - 4054087 | 6941.44 |
| arac family transcriptional regulator | KR76_RS19935 | Not Available | Negative | 4054151 - 4055107 | 33937.9 |
| type 1 glutamine amidotransferase domain-containing protein | KR76_RS19940 | Not Available | Positive | 4055207 - 4055776 | 20056.4 |
| fibronectin type iii domain-containing protein | KR76_RS28430 | Not Available | Negative | 4055799 - 4058567 | 89079.2 |
| acyl-coa dehydrogenase family protein | KR76_RS19950 | Not Available | Negative | 4058661 - 4059830 | 41739.3 |
| tetr/acrr family transcriptional regulator | KR76_RS19955 | Not Available | Positive | 4059913 - 4060614 | 24820.4 |
| coa-binding protein | KR76_RS19960 | Not Available | Positive | 4060611 - 4061030 | 15050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
