Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase/phosphoglucomutase | KR76_RS19770 | Not Available | Negative | 4019511 - 4020890 | 48773.9 |
| duf3499 domain-containing protein | KR76_RS19775 | Not Available | Negative | 4020924 - 4021301 | 13578.1 |
| metallopeptidase family protein | KR76_RS19780 | Not Available | Positive | 4021352 - 4021819 | 17349.3 |
| duf5719 family protein | KR76_RS19785 | Not Available | Negative | 4021836 - 4023281 | 48204.6 |
| glycosyltransferase family 2 protein | KR76_RS19790 | Not Available | Negative | 4023274 - 4026102 | 99023.4 |
| whib family transcriptional regulator | KR76_RS19795 | Not Available | Negative | 4026221 - 4026475 | 9576.35 |
| 2-phospho-l-lactate transferase | KR76_RS19800 | Not Available | Positive | 4026668 - 4027678 | 35382.5 |
| coenzyme f420-0:l-glutamate ligase | KR76_RS19805 | Not Available | Positive | 4027678 - 4028655 | 33421.4 |
| duf3105 domain-containing protein | KR76_RS19810 | Not Available | Positive | 4028702 - 4029451 | 27535.3 |
| mannose-1-phosphate guanylyltransferase | KR76_RS19815 | Not Available | Negative | 4029731 - 4030810 | 37522.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
