Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | KR76_RS19670 | Not Available | Positive | 4000281 - 4001006 | 26165.1 |
| 4fe-4s dicluster domain-containing protein | KR76_RS19680 | Not Available | Positive | 4001006 - 4001251 | 8868.75 |
| ferredoxin | KR76_RS19685 | Not Available | Positive | 4001248 - 4001568 | 11158.1 |
| winged helix-turn-helix domain-containing protein | KR76_RS19690 | Not Available | Negative | 4001573 - 4002784 | 45516.4 |
| response regulator | KR76_RS19695 | Not Available | Negative | 4002935 - 4003594 | 23689.8 |
| ribosome hibernation-promoting factor, hpf/yfia family | KR76_RS19700 | Not Available | Negative | 4003695 - 4004318 | 23234.5 |
| comf family protein | KR76_RS19705 | Not Available | Negative | 4004839 - 4005579 | 25193.0 |
| lpqb family beta-propeller domain-containing protein | KR76_RS19710 | Not Available | Negative | 4005642 - 4007378 | 60347.8 |
| mtrab system histidine kinase mtrb | KR76_RS19715 | Not Available | Negative | 4007375 - 4009129 | 63767.1 |
| mtrab system response regulator mtra | KR76_RS19720 | Not Available | Negative | 4009101 - 4009808 | 25762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
