Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease signature motif containing protein | KR76_RS19520 | Not Available | Positive | 3969640 - 3970926 | 46781.1 |
| diadenosine tetraphosphate hydrolase | KR76_RS19525 | Not Available | Negative | 3970974 - 3971468 | 17900.4 |
| rod shape-determining protein roda | KR76_RS19530 | Not Available | Negative | 3971507 - 3972730 | 43216.9 |
| penicillin-binding protein 2 | KR76_RS19535 | Not Available | Negative | 3972727 - 3974856 | 76850.4 |
| rod shape-determining protein mred | KR76_RS19540 | Not Available | Negative | 3974860 - 3975459 | 20417.4 |
| rod shape-determining protein mrec | KR76_RS19545 | Not Available | Negative | 3975456 - 3976391 | 31844.9 |
| rod shape-determining protein | KR76_RS19550 | Not Available | Negative | 3976391 - 3977422 | 36910.8 |
| nucleoside-diphosphate kinase | KR76_RS19555 | Not Available | Negative | 3977623 - 3978033 | 14777.6 |
| protein-tyrosine phosphatase family protein | KR76_RS19560 | Not Available | Positive | 3978081 - 3978539 | 16377.7 |
| merr family transcriptional regulator | KR76_RS19565 | Not Available | Negative | 3978514 - 3979275 | 28269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
