Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 16 protein | KR76_RS19470 | Not Available | Negative | 3957477 - 3958706 | 43319.5 |
| hypothetical protein | KR76_RS19475 | Not Available | Negative | 3958859 - 3959116 | 8947.92 |
| zinc-dependent metalloprotease family protein | KR76_RS19480 | Not Available | Positive | 3959251 - 3961545 | 78104.7 |
| tigr03960 family b12-binding radical sam protein | KR76_RS19485 | Not Available | Negative | 3961580 - 3963532 | 72547.6 |
| calcium:proton antiporter | KR76_RS19490 | Not Available | Positive | 3963604 - 3964722 | 38031.9 |
| hypothetical protein | KR76_RS19495 | Not Available | Positive | 3964719 - 3965600 | 30852.7 |
| hypothetical protein | KR76_RS19500 | Not Available | Positive | 3965625 - 3966524 | 30460.2 |
| copper resistance copc/copd family protein | KR76_RS19505 | Not Available | Negative | 3966532 - 3968175 | 56126.4 |
| ycni family protein | KR76_RS19510 | Not Available | Negative | 3968185 - 3968913 | 24674.6 |
| hypothetical protein | KR76_RS29725 | Not Available | Negative | 3968986 - 3969531 | 19117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
