Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | KR76_RS19420 | Not Available | Negative | 3946957 - 3948516 | 55371.2 |
| 50s ribosomal protein l27 | KR76_RS19425 | Not Available | Negative | 3948602 - 3948856 | 8820.64 |
| 50s ribosomal protein l21 | KR76_RS19430 | Not Available | Negative | 3948895 - 3949197 | 10756.1 |
| rne/rng family ribonuclease | KR76_RS19435 | Not Available | Negative | 3949390 - 3952497 | 109527.0 |
| tigr03936 family radical sam-associated protein | KR76_RS19440 | Not Available | Negative | 3952799 - 3953518 | 25223.1 |
| winged helix dna-binding domain-containing protein | KR76_RS19445 | Not Available | Negative | 3953535 - 3954734 | 43257.2 |
| duf4190 domain-containing protein | KR76_RS19450 | Not Available | Positive | 3954766 - 3955491 | 24446.2 |
| hypothetical protein | KR76_RS19455 | Not Available | Positive | 3955496 - 3956167 | 23050.8 |
| hypothetical protein | KR76_RS19460 | Not Available | Positive | 3956164 - 3956898 | 26480.8 |
| atp-binding protein | KR76_RS28410 | Not Available | Negative | 3956909 - 3957448 | 18364.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
