Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS19220 | Not Available | Positive | 3901892 - 3902371 | 17620.1 |
| abc transporter substrate-binding protein | KR76_RS28395 | Not Available | Positive | 3902504 - 3903511 | 35069.1 |
| abc transporter permease | KR76_RS19230 | Not Available | Positive | 3903508 - 3904326 | 28977.1 |
| abc transporter atp-binding protein | KR76_RS19235 | Not Available | Positive | 3904323 - 3905081 | 27063.1 |
| abc transporter substrate-binding protein | KR76_RS19240 | Not Available | Positive | 3905078 - 3906112 | 36652.2 |
| llm class flavin-dependent oxidoreductase | KR76_RS19245 | Not Available | Positive | 3906109 - 3906996 | 32225.0 |
| llm class flavin-dependent oxidoreductase | KR76_RS19250 | Not Available | Positive | 3906996 - 3908198 | 43147.7 |
| abc transporter substrate-binding protein | KR76_RS19255 | Not Available | Positive | 3908195 - 3909133 | 34138.0 |
| pyridoxamine 5'-phosphate oxidase family protein | KR76_RS30970 | Not Available | Negative | 3909121 - 3910107 | 35593.8 |
| dihydroxy-acid dehydratase | KR76_RS19265 | Not Available | Negative | 3910111 - 3911958 | 64764.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
