Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | KR76_RS19025 | Not Available | Positive | 3858651 - 3859520 | 30098.9 |
| hypothetical protein | KR76_RS29720 | Not Available | Negative | 3859423 - 3859701 | 10291.2 |
| branched-chain amino acid aminotransferase | KR76_RS19030 | Not Available | Negative | 3859728 - 3860807 | 39360.7 |
| 3-isopropylmalate dehydrogenase | KR76_RS19035 | Not Available | Negative | 3860889 - 3861989 | 38597.1 |
| hypothetical protein | KR76_RS19040 | Not Available | Negative | 3862000 - 3862185 | 6665.41 |
| o-methyltransferase | KR76_RS19045 | Not Available | Positive | 3862623 - 3863192 | 20217.1 |
| fha domain-containing protein | KR76_RS19050 | Not Available | Negative | 3863447 - 3864232 | 26700.1 |
| vwa domain-containing protein | KR76_RS19055 | Not Available | Negative | 3864229 - 3865518 | 45316.4 |
| pp2c family serine/threonine-protein phosphatase | KR76_RS19060 | Not Available | Negative | 3865511 - 3866671 | 38923.3 |
| serine/threonine-protein kinase | KR76_RS19065 | Not Available | Negative | 3866668 - 3869103 | 85344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
