Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 3808269 - 3811392 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3811781 - 3813299 | Not Available |
| tyrosine--trna ligase | KR76_RS18790 | Not Available | Negative | 3813808 - 3815079 | 45909.5 |
| serine/threonine-protein kinase | KR76_RS18795 | Not Available | Positive | 3815213 - 3816562 | 47159.6 |
| hypothetical protein | KR76_RS18800 | Not Available | Positive | 3816603 - 3817457 | 29854.1 |
| dna adenine methylase | KR76_RS18805 | Not Available | Negative | 3817426 - 3818487 | 38994.5 |
| duf72 domain-containing protein | KR76_RS18810 | Not Available | Positive | 3818537 - 3819280 | 28015.0 |
| pig-l deacetylase family protein | KR76_RS18815 | Not Available | Positive | 3819293 - 3820039 | 26905.4 |
| arsenate reductase arsc | KR76_RS18820 | Not Available | Negative | 3820052 - 3820486 | 15191.1 |
| aquaporin | KR76_RS18825 | Not Available | Negative | 3820483 - 3821175 | 23024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
