Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | KR76_RS18680 | Not Available | Positive | 3788300 - 3788824 | 19404.3 |
| biotin synthase biob | KR76_RS18685 | Not Available | Positive | 3788940 - 3790010 | 38060.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | KR76_RS18690 | Not Available | Positive | 3790016 - 3791299 | 45215.4 |
| 8-amino-7-oxononanoate synthase | KR76_RS18695 | Not Available | Positive | 3791296 - 3792423 | 38133.7 |
| dethiobiotin synthase | KR76_RS18700 | Not Available | Positive | 3792420 - 3793100 | 22640.2 |
| amidase | KR76_RS18705 | Not Available | Negative | 3793169 - 3794596 | 49327.8 |
| slc13 family permease | KR76_RS18710 | Not Available | Negative | 3794642 - 3795643 | 35439.8 |
| alpha/beta fold hydrolase | KR76_RS18715 | Not Available | Negative | 3795656 - 3796645 | 36253.6 |
| pucr family transcriptional regulator | KR76_RS18720 | Not Available | Positive | 3796748 - 3797932 | 41111.0 |
| acyltransferase domain-containing protein | KR76_RS18725 | Not Available | Positive | 3798149 - 3799348 | 41816.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
