Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | KR76_RS18480 | Not Available | Negative | 3748406 - 3749119 | 23936.4 |
| rna polymerase sigma factor | KR76_RS18485 | Not Available | Negative | 3749116 - 3749640 | 19141.9 |
| m14 family zinc carboxypeptidase | KR76_RS18490 | Not Available | Negative | 3749740 - 3752841 | 108821.0 |
| Trna-glu | Not Available | Not Available | Positive | 3753106 - 3753178 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 3753285 - 3753359 | Not Available |
| type ii caax prenyl endopeptidase rce1 family protein | KR76_RS18505 | Not Available | Negative | 3753405 - 3754388 | 34234.1 |
| glutamate--trna ligase | KR76_RS18510 | Not Available | Negative | 3754375 - 3755838 | 53692.7 |
| fumarylacetoacetate hydrolase family protein | KR76_RS18515 | Not Available | Negative | 3755835 - 3756647 | 28952.5 |
| putative ig domain-containing protein | KR76_RS28365 | Not Available | Negative | 3756699 - 3759260 | 85969.1 |
| hypothetical protein | KR76_RS18525 | Not Available | Positive | 3759361 - 3760212 | 31210.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
