Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | KR76_RS18380 | Not Available | Negative | 3727668 - 3728264 | 20693.6 |
| atp-dependent dna helicase recg | KR76_RS18385 | Not Available | Negative | 3728261 - 3730528 | 81496.3 |
| dak2 domain-containing protein | KR76_RS18390 | Not Available | Negative | 3730536 - 3732203 | 56488.0 |
| 50s ribosomal protein l28 | KR76_RS18395 | Not Available | Positive | 3732350 - 3732535 | 6887.53 |
| thiamine-phosphate kinase | KR76_RS18400 | Not Available | Negative | 3732711 - 3733682 | 33115.3 |
| lrp/asnc family transcriptional regulator | KR76_RS18405 | Not Available | Positive | 3733811 - 3734044 | 8262.05 |
| duf3515 family protein | KR76_RS18410 | Not Available | Positive | 3734047 - 3734562 | 18082.3 |
| d-alanine--d-alanine ligase family protein | KR76_RS18415 | Not Available | Negative | 3734572 - 3735696 | 39798.5 |
| trans-sulfuration enzyme family protein | KR76_RS18420 | Not Available | Positive | 3735721 - 3736800 | 37924.0 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | KR76_RS18425 | Not Available | Negative | 3737261 - 3738274 | 35260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
