Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation csta family protein | KR76_RS18280 | Not Available | Positive | 3708230 - 3710413 | 77318.0 |
| ybdd/yjix family protein | KR76_RS18285 | Not Available | Positive | 3710410 - 3710595 | 7375.66 |
| hypothetical protein | KR76_RS18290 | Not Available | Positive | 3710614 - 3710895 | 9684.53 |
| [protein-pii] uridylyltransferase | KR76_RS18295 | Not Available | Negative | 3710879 - 3713107 | 79945.4 |
| p-ii family nitrogen regulator | KR76_RS18300 | Not Available | Negative | 3713124 - 3713462 | 12091.5 |
| ammonium transporter | KR76_RS18305 | Not Available | Negative | 3713459 - 3714766 | 44646.8 |
| p-ii family nitrogen regulator | KR76_RS18310 | Not Available | Negative | 3714885 - 3715223 | 12158.6 |
| ammonium transporter | KR76_RS18315 | Not Available | Negative | 3715220 - 3716584 | 46860.4 |
| signal recognition particle-docking protein ftsy | KR76_RS18320 | Not Available | Negative | 3716679 - 3717830 | 40180.4 |
| hypothetical protein | KR76_RS18325 | Not Available | Negative | 3717901 - 3718089 | 6629.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
