Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | KR76_RS18235 | Not Available | Negative | 3700560 - 3701417 | 31061.0 |
| 50s ribosomal protein l19 | KR76_RS18240 | Not Available | Negative | 3701579 - 3701941 | 13369.3 |
| gnat family n-acetyltransferase | KR76_RS30960 | Not Available | Negative | 3702086 - 3702460 | 13618.5 |
| mfs transporter | KR76_RS30965 | Not Available | Negative | 3702578 - 3703267 | 25304.8 |
| ribosome maturation factor rimm | KR76_RS18250 | Not Available | Negative | 3703264 - 3703812 | 19632.2 |
| rna-binding protein | KR76_RS18255 | Not Available | Negative | 3703899 - 3704138 | 8602.3 |
| 30s ribosomal protein s16 | KR76_RS18260 | Not Available | Negative | 3704143 - 3704646 | 18324.7 |
| amidohydrolase family protein | KR76_RS18265 | Not Available | Negative | 3704840 - 3705913 | 38142.8 |
| nyn domain-containing protein | KR76_RS18270 | Not Available | Negative | 3706110 - 3706475 | 12667.2 |
| signal recognition particle protein | KR76_RS18275 | Not Available | Negative | 3706472 - 3708040 | 55684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
