Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan 2,3-dioxygenase | KR76_RS18135 | Not Available | Positive | 3679916 - 3680716 | 30092.6 |
| hypothetical protein | KR76_RS18140 | Not Available | Positive | 3680713 - 3681834 | 40007.5 |
| phosphatidate cytidylyltransferase | KR76_RS18145 | Not Available | Negative | 3681819 - 3682694 | 30404.1 |
| ribosome recycling factor | KR76_RS18150 | Not Available | Negative | 3682721 - 3683275 | 20398.4 |
| ump kinase | KR76_RS18155 | Not Available | Negative | 3683303 - 3684016 | 25503.1 |
| hypothetical protein | KR76_RS18160 | Not Available | Negative | 3684113 - 3684391 | 10167.8 |
| tfiib-type zinc ribbon-containing protein | KR76_RS18165 | Not Available | Negative | 3684388 - 3685644 | 46185.6 |
| spfh domain-containing protein | KR76_RS18170 | Not Available | Negative | 3685646 - 3686854 | 41748.1 |
| translation elongation factor ts | KR76_RS18175 | Not Available | Negative | 3687078 - 3687887 | 28245.8 |
| 30s ribosomal protein s2 | KR76_RS18180 | Not Available | Negative | 3687932 - 3688864 | 33577.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
