Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | KR76_RS18085 | Not Available | Negative | 3670031 - 3671317 | 45790.8 |
| log family protein | KR76_RS18090 | Not Available | Positive | 3671435 - 3672514 | 38565.7 |
| glycosyltransferase family 4 protein | KR76_RS18095 | Not Available | Negative | 3672522 - 3673652 | 40662.8 |
| hypothetical protein | KR76_RS18100 | Not Available | Negative | 3673740 - 3674120 | 13024.5 |
| tigr03767 family metallophosphoesterase | KR76_RS18105 | Not Available | Positive | 3674234 - 3675994 | 61980.4 |
| hypothetical protein | KR76_RS18110 | Not Available | Positive | 3676023 - 3676517 | 18209.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | KR76_RS18115 | Not Available | Negative | 3676527 - 3677645 | 40667.1 |
| hypothetical protein | KR76_RS18120 | Not Available | Negative | 3677693 - 3678061 | 13409.6 |
| ycii family protein | KR76_RS30595 | Not Available | Positive | 3678221 - 3678640 | 15288.9 |
| rna polymerase sigma factor | KR76_RS18130 | Not Available | Positive | 3678637 - 3679905 | 45172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
