Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | KR76_RS18035 | Not Available | Negative | 3662188 - 3662994 | 26276.4 |
| tetr family transcriptional regulator | KR76_RS18040 | Not Available | Negative | 3662991 - 3663629 | 22743.2 |
| rieske 2fe-2s domain-containing protein | KR76_RS18045 | Not Available | Positive | 3663774 - 3664907 | 43204.5 |
| hypothetical protein | KR76_RS18050 | Not Available | Positive | 3664904 - 3665224 | 11281.3 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS18055 | Not Available | Positive | 3665221 - 3666015 | 27258.8 |
| iclr family transcriptional regulator | KR76_RS18060 | Not Available | Negative | 3666002 - 3666829 | 29538.6 |
| tigr03619 family f420-dependent llm class oxidoreductase | KR76_RS18065 | Not Available | Positive | 3667009 - 3667890 | 31041.8 |
| nuclear transport factor 2 family protein | KR76_RS18070 | Not Available | Positive | 3667887 - 3668354 | 17090.2 |
| nuclear transport factor 2 family protein | KR76_RS18075 | Not Available | Negative | 3668351 - 3668854 | 18591.8 |
| homoserine o-acetyltransferase | KR76_RS18080 | Not Available | Negative | 3668917 - 3670020 | 40013.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
