Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | KR76_RS17940 | Not Available | Positive | 3639165 - 3640061 | 31896.5 |
| spaa isopeptide-forming pilin-related protein | KR76_RS30285 | Not Available | Negative | 3640068 - 3643544 | 120049.0 |
| ei24 domain-containing protein | KR76_RS17950 | Not Available | Negative | 3643688 - 3644419 | 25163.8 |
| co-chaperone ybbn | KR76_RS17955 | Not Available | Negative | 3644449 - 3645420 | 33281.0 |
| ph domain-containing protein | KR76_RS17960 | Not Available | Negative | 3645564 - 3646100 | 20026.8 |
| hypothetical protein | KR76_RS30290 | Not Available | Negative | 3646114 - 3646284 | 5852.17 |
| m1 family metallopeptidase | KR76_RS17965 | Not Available | Negative | 3646389 - 3647831 | 52409.3 |
| serine protein kinase rio | KR76_RS17970 | Not Available | Positive | 3648005 - 3648868 | 32269.0 |
| duf2231 domain-containing protein | KR76_RS17975 | Not Available | Negative | 3648865 - 3649374 | 17477.4 |
| tsup family transporter | KR76_RS17980 | Not Available | Negative | 3649407 - 3650156 | 24541.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
