Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | KR76_RS17750 | Not Available | Negative | 3601827 - 3602138 | 11408.3 |
| catalase/peroxidase hpi | KR76_RS17755 | Not Available | Negative | 3602266 - 3604476 | 79965.9 |
| fur family transcriptional regulator | KR76_RS17760 | Not Available | Negative | 3604494 - 3604919 | 15190.9 |
| hypothetical protein | KR76_RS30280 | Not Available | Positive | 3605019 - 3605195 | 6363.57 |
| superoxide dismutase, ni | KR76_RS17765 | Not Available | Negative | 3605267 - 3605662 | 14692.5 |
| flavin reductase family protein | KR76_RS17770 | Not Available | Negative | 3605701 - 3606231 | 18231.7 |
| ferredoxin | KR76_RS17775 | Not Available | Negative | 3606228 - 3606551 | 11605.6 |
| duf1877 family protein | KR76_RS17780 | Not Available | Negative | 3606623 - 3607105 | 16953.7 |
| hypothetical protein | KR76_RS17785 | Not Available | Positive | 3607228 - 3607818 | 20473.0 |
| hypothetical protein | KR76_RS17790 | Not Available | Negative | 3607858 - 3608043 | 6041.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
