Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | KR76_RS17650 | Not Available | Negative | 3577976 - 3579154 | 41095.2 |
| 5-guanidino-2-oxopentanoate decarboxylase | KR76_RS17655 | Not Available | Negative | 3579151 - 3580770 | 54128.1 |
| sdr family oxidoreductase | KR76_RS17660 | Not Available | Negative | 3580774 - 3581565 | 26919.8 |
| acetate--coa ligase family protein | KR76_RS17665 | Not Available | Negative | 3581562 - 3583643 | 70953.3 |
| acyl-coa dehydrogenase family protein | KR76_RS17670 | Not Available | Negative | 3583640 - 3584806 | 42385.2 |
| abc transporter atp-binding protein | KR76_RS17675 | Not Available | Negative | 3584839 - 3585912 | 38710.5 |
| abc transporter permease | KR76_RS17680 | Not Available | Negative | 3585933 - 3586739 | 28726.0 |
| abc transporter permease | KR76_RS17685 | Not Available | Negative | 3586736 - 3587656 | 33138.7 |
| abc transporter substrate-binding protein | KR76_RS17690 | Not Available | Negative | 3587653 - 3588693 | 38319.7 |
| tetr/acrr family transcriptional regulator | KR76_RS17695 | Not Available | Negative | 3588946 - 3589542 | 22425.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
