Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-hairpin-helix domain-containing protein | KR76_RS17600 | Not Available | Negative | 3568688 - 3569641 | 31478.8 |
| degv family protein | KR76_RS17605 | Not Available | Negative | 3569773 - 3570645 | 29347.2 |
| cytosine permease | KR76_RS17610 | Not Available | Negative | 3570655 - 3572082 | 50219.0 |
| hypothetical protein | KR76_RS30580 | Not Available | Negative | 3572079 - 3572240 | 5711.12 |
| flavin monoamine oxidase family protein | KR76_RS17620 | Not Available | Positive | 3572338 - 3573687 | 47812.9 |
| tetr family transcriptional regulator c-terminal domain-containing protein | KR76_RS17625 | Not Available | Negative | 3573635 - 3574282 | 23442.0 |
| hypothetical protein | KR76_RS17630 | Not Available | Positive | 3574372 - 3574632 | 9845.67 |
| nad(p)/fad-dependent oxidoreductase | KR76_RS17635 | Not Available | Negative | 3574620 - 3575654 | 35418.1 |
| dmt family transporter | KR76_RS17640 | Not Available | Negative | 3575665 - 3576570 | 31121.9 |
| aldehyde dehydrogenase family protein | KR76_RS17645 | Not Available | Negative | 3576567 - 3577979 | 48295.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
