Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | KR76_RS17550 | Not Available | Negative | 3556710 - 3557399 | 24549.3 |
| aminoglycoside phosphotransferase family protein | KR76_RS17555 | Not Available | Negative | 3557421 - 3558356 | 34906.0 |
| n-acyl homoserine lactonase family protein | KR76_RS17560 | Not Available | Positive | 3558401 - 3559102 | 24890.4 |
| translation elongation factor 4 | KR76_RS17565 | Not Available | Negative | 3559115 - 3560992 | 68148.2 |
| alkaline phosphatase d family protein | KR76_RS17570 | Not Available | Positive | 3561107 - 3562702 | 57767.0 |
| phosphotransferase | KR76_RS30275 | Not Available | Positive | 3562738 - 3563664 | 33509.6 |
| 30s ribosomal protein s20 | KR76_RS17580 | Not Available | Positive | 3563824 - 3564084 | 9396.36 |
| dna polymerase iii subunit delta | KR76_RS17585 | Not Available | Negative | 3564208 - 3565182 | 34316.7 |
| comec/rec2 family competence protein | KR76_RS17590 | Not Available | Negative | 3565211 - 3567595 | 80667.9 |
| hpp family protein | KR76_RS17595 | Not Available | Positive | 3567623 - 3568660 | 35637.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
