Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3097 domain-containing protein | KR76_RS17500 | Not Available | Positive | 3546215 - 3547057 | 31028.3 |
| mfs transporter | KR76_RS31365 | Not Available | Negative | 3547139 - 3548002 | 28180.3 |
| plp-dependent aminotransferase family protein | KR76_RS17510 | Not Available | Positive | 3548026 - 3549510 | 52549.0 |
| duf6752 domain-containing protein | KR76_RS17515 | Not Available | Negative | 3549428 - 3549652 | 8722.56 |
| methyltransferase domain-containing protein | KR76_RS17520 | Not Available | Negative | 3549649 - 3551193 | 55789.4 |
| adenylyltransferase/cytidyltransferase family protein | KR76_RS17525 | Not Available | Negative | 3551190 - 3551624 | 15776.9 |
| radical sam family heme chaperone hemw | KR76_RS17530 | Not Available | Negative | 3551750 - 3552961 | 43687.4 |
| hypothetical protein | KR76_RS17535 | Not Available | Negative | 3552986 - 3553855 | 30252.3 |
| intradiol ring-cleavage dioxygenase | KR76_RS17540 | Not Available | Negative | 3553914 - 3554786 | 30017.4 |
| amp-dependent synthetase/ligase | KR76_RS17545 | Not Available | Negative | 3554831 - 3556663 | 66364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
