Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sige family rna polymerase sigma factor | KR76_RS17450 | Not Available | Positive | 3537313 - 3537834 | 19761.7 |
| hypothetical protein | KR76_RS17455 | Not Available | Positive | 3537831 - 3538793 | 33616.5 |
| gmad2 immunoglobulin-like domain-containing protein | KR76_RS17460 | Not Available | Positive | 3538825 - 3539742 | 31293.4 |
| winged helix dna-binding domain-containing protein | KR76_RS17465 | Not Available | Positive | 3539749 - 3540801 | 38524.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | KR76_RS17470 | Not Available | Negative | 3540806 - 3541549 | 26051.1 |
| molecular chaperone dnaj | KR76_RS17475 | Not Available | Negative | 3541563 - 3542732 | 41353.8 |
| heat-inducible transcriptional repressor hrca | KR76_RS17480 | Not Available | Negative | 3542746 - 3543780 | 36834.9 |
| hypothetical protein | KR76_RS17485 | Not Available | Positive | 3543944 - 3544708 | 27090.2 |
| mbl fold metallo-hydrolase | KR76_RS17490 | Not Available | Positive | 3544863 - 3545642 | 27570.6 |
| hypothetical protein | KR76_RS17495 | Not Available | Positive | 3545682 - 3546203 | 18427.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
