Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | KR76_RS17400 | Not Available | Negative | 3529654 - 3530568 | 32062.4 |
| hypothetical protein | KR76_RS17405 | Not Available | Negative | 3530637 - 3530984 | 11488.6 |
| duf1330 domain-containing protein | KR76_RS17410 | Not Available | Positive | 3531026 - 3531313 | 10053.9 |
| mbl fold metallo-hydrolase | KR76_RS17415 | Not Available | Positive | 3531319 - 3532242 | 32995.3 |
| hemolysin family protein | KR76_RS17420 | Not Available | Negative | 3532229 - 3533518 | 47132.8 |
| rrna maturation rnase ybey | KR76_RS17425 | Not Available | Negative | 3533515 - 3533985 | 17231.6 |
| phoh family protein | KR76_RS17430 | Not Available | Negative | 3533982 - 3535052 | 38912.0 |
| hit domain-containing protein | KR76_RS17435 | Not Available | Negative | 3535256 - 3535603 | 12302.5 |
| hypothetical protein | KR76_RS17440 | Not Available | Negative | 3535669 - 3536535 | 31707.5 |
| rna polymerase sigma factor | KR76_RS28345 | Not Available | Positive | 3536623 - 3537195 | 21099.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
