Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | KR76_RS17300 | Not Available | Negative | 3506130 - 3507002 | 30553.1 |
| 2-isopropylmalate synthase | KR76_RS17305 | Not Available | Negative | 3507006 - 3508757 | 64461.9 |
| catalase | KR76_RS17310 | Not Available | Positive | 3508959 - 3511157 | 78845.7 |
| flavodoxin family protein | KR76_RS17315 | Not Available | Positive | 3511167 - 3511676 | 17154.1 |
| septum formation family protein | KR76_RS17320 | Not Available | Positive | 3511693 - 3512496 | 29369.1 |
| septum formation family protein | KR76_RS17325 | Not Available | Positive | 3512501 - 3513343 | 29745.7 |
| gtpase era | KR76_RS17330 | Not Available | Negative | 3513364 - 3514404 | 37669.9 |
| siderophore-interacting protein | KR76_RS17335 | Not Available | Negative | 3514401 - 3515207 | 29222.6 |
| duf6916 family protein | KR76_RS17340 | Not Available | Negative | 3515242 - 3515664 | 15473.9 |
| duf6916 family protein | KR76_RS17345 | Not Available | Positive | 3515691 - 3515999 | 10956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
