Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin/lipoyl-containing protein | KR76_RS17250 | Not Available | Positive | 3497147 - 3497389 | 8044.52 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | KR76_RS17255 | Not Available | Positive | 3497386 - 3498357 | 33303.9 |
| alpha-ketoacid dehydrogenase subunit beta | KR76_RS17260 | Not Available | Positive | 3498354 - 3499346 | 34022.4 |
| aspartate aminotransferase family protein | KR76_RS17265 | Not Available | Positive | 3499343 - 3500728 | 49282.4 |
| abc transporter substrate-binding protein | KR76_RS17270 | Not Available | Positive | 3500725 - 3501702 | 32940.1 |
| abc transporter permease | KR76_RS17275 | Not Available | Positive | 3501716 - 3502666 | 33044.1 |
| abc transporter atp-binding protein | KR76_RS17280 | Not Available | Positive | 3502650 - 3503486 | 29412.6 |
| 2-oxo acid dehydrogenase subunit e2 | KR76_RS17285 | Not Available | Positive | 3503483 - 3504136 | 22966.8 |
| lipoyl synthase | KR76_RS17290 | Not Available | Positive | 3504136 - 3505083 | 35111.8 |
| pyridoxal phosphate-dependent aminotransferase | KR76_RS17295 | Not Available | Positive | 3505080 - 3506123 | 36186.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
