Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | KR76_RS31360 | Not Available | Negative | 3486212 - 3487126 | 30316.6 |
| nuclear transport factor 2 family protein | KR76_RS17205 | Not Available | Positive | 3487197 - 3487583 | 13525.0 |
| mfs transporter | KR76_RS17210 | Not Available | Negative | 3487537 - 3488970 | 48206.2 |
| helix-turn-helix transcriptional regulator | KR76_RS17215 | Not Available | Positive | 3489073 - 3489909 | 30523.4 |
| peroxiredoxin | KR76_RS17220 | Not Available | Negative | 3490215 - 3490703 | 17594.6 |
| amp-binding protein | KR76_RS17225 | Not Available | Negative | 3490712 - 3492355 | 58808.4 |
| duf3052 domain-containing protein | KR76_RS17230 | Not Available | Negative | 3492366 - 3492743 | 12985.3 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | KR76_RS17235 | Not Available | Positive | 3493034 - 3495781 | 101408.0 |
| hypothetical protein | KR76_RS17240 | Not Available | Negative | 3495760 - 3496146 | 12292.5 |
| fadr/gntr family transcriptional regulator | KR76_RS17245 | Not Available | Negative | 3496287 - 3496991 | 25236.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
