Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-3b c(17)-methyltransferase | KR76_RS17050 | Not Available | Positive | 3457764 - 3459302 | 54088.6 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbie | KR76_RS17055 | Not Available | Positive | 3459290 - 3460486 | 41209.7 |
| precorrin-4 c(11)-methyltransferase | KR76_RS17060 | Not Available | Positive | 3460483 - 3461241 | 26354.6 |
| vwa domain-containing protein | KR76_RS17065 | Not Available | Positive | 3461238 - 3463283 | 71035.3 |
| 5,6-dimethylbenzimidazole synthase | KR76_RS17070 | Not Available | Positive | 3463280 - 3463912 | 23375.9 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | KR76_RS17075 | Not Available | Positive | 3463905 - 3464486 | 21684.7 |
| cobyrinate a,c-diamide synthase | KR76_RS30945 | Not Available | Positive | 3464483 - 3465808 | 44898.6 |
| rv2231c family pyridoxal phosphate-dependent protein cobc | KR76_RS30950 | Not Available | Positive | 3465801 - 3466796 | 35425.4 |
| duf6318 family protein | KR76_RS17090 | Not Available | Positive | 3467119 - 3467556 | 15812.5 |
| pkd domain-containing protein | KR76_RS28330 | Not Available | Positive | 3467553 - 3468302 | 25953.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
