Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | KR76_RS17000 | Not Available | Positive | 3448168 - 3448947 | 25477.9 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | KR76_RS17005 | Not Available | Negative | 3448963 - 3449493 | 18568.2 |
| rnb domain-containing ribonuclease | KR76_RS17010 | Not Available | Negative | 3449490 - 3450938 | 51471.3 |
| peroxide stress protein yaaa | KR76_RS17015 | Not Available | Positive | 3450963 - 3451742 | 27295.1 |
| hypothetical protein | KR76_RS17020 | Not Available | Positive | 3451868 - 3453001 | 41937.0 |
| bifunctional rnase h/acid phosphatase | KR76_RS17025 | Not Available | Negative | 3452949 - 3454139 | 41623.0 |
| zinc ribbon domain-containing protein | KR76_RS17030 | Not Available | Negative | 3454139 - 3454882 | 26836.7 |
| nif3-like dinuclear metal center hexameric protein | KR76_RS17035 | Not Available | Negative | 3454879 - 3456000 | 39123.7 |
| nitrite reductase | KR76_RS17040 | Not Available | Positive | 3456269 - 3457105 | 28604.5 |
| precorrin-8x methylmutase | KR76_RS17045 | Not Available | Positive | 3457102 - 3457767 | 23264.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
