Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | KR76_RS16625 | Not Available | Positive | 3394060 - 3394923 | 30050.8 |
| nadh:flavin oxidoreductase/nadh oxidase family protein | KR76_RS16630 | Not Available | Positive | 3394920 - 3396164 | 44233.6 |
| tetr/acrr family transcriptional regulator | KR76_RS16635 | Not Available | Negative | 3396161 - 3396784 | 22131.1 |
| hypothetical protein | KR76_RS16640 | Not Available | Negative | 3396786 - 3397064 | 10246.7 |
| hypothetical protein | KR76_RS16645 | Not Available | Negative | 3397102 - 3397296 | 7254.08 |
| tetratricopeptide repeat protein | KR76_RS16650 | Not Available | Negative | 3397306 - 3397728 | 15915.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 3397781 - 3398150 | Not Available |
| hypothetical protein | KR76_RS16750 | Not Available | Positive | 3412937 - 3413320 | 13587.0 |
| duf6093 family protein | KR76_RS16755 | Not Available | Positive | 3413317 - 3413781 | 16425.6 |
| hypothetical protein | KR76_RS16760 | Not Available | Positive | 3413781 - 3414185 | 14928.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
