Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | KR76_RS16475 | Not Available | Positive | 3358706 - 3359572 | 30914.7 |
| pqq-dependent sugar dehydrogenase | KR76_RS16480 | Not Available | Positive | 3359609 - 3360766 | 41997.5 |
| catb-related o-acetyltransferase | KR76_RS31295 | Not Available | Positive | 3360798 - 3361526 | 26358.2 |
| m3 family metallopeptidase | KR76_RS16490 | Not Available | Negative | 3361528 - 3363555 | 73812.5 |
| hypothetical protein | KR76_RS30255 | Not Available | Negative | 3363566 - 3364789 | 41399.1 |
| thymidine kinase | KR76_RS16500 | Not Available | Positive | 3364924 - 3365592 | 24551.1 |
| hypothetical protein | KR76_RS16505 | Not Available | Negative | 3365593 - 3366360 | 26680.2 |
| hypothetical protein | KR76_RS16510 | Not Available | Negative | 3366438 - 3367196 | 25929.3 |
| alkaline phosphatase family protein | KR76_RS16515 | Not Available | Negative | 3367339 - 3368481 | 40371.7 |
| duf5998 family protein | KR76_RS16520 | Not Available | Negative | 3368486 - 3369073 | 20624.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
