Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rect-like ssdna binding protein | KR76_RS27715 | Not Available | Positive | 377539 - 378528 | 35802.8 |
| Putative rna-binding protein | KR76_RS27720 | Not Available | Positive | 378528 - 378902 | 13721.1 |
| hypothetical protein | KR76_RS01790 | Not Available | Positive | 378899 - 379177 | 10158.1 |
| hypothetical protein | KR76_RS01795 | Not Available | Positive | 379337 - 379690 | 12564.7 |
| hypothetical protein | KR76_RS29960 | Not Available | Positive | 379687 - 379857 | 6417.39 |
| Holliday junction resolvase | KR76_RS01805 | Not Available | Positive | 379857 - 380222 | 13407.9 |
| Hypothetical protein | KR76_RS01810 | Not Available | Positive | 380219 - 380557 | 11883.8 |
| Methylase | KR76_RS01815 | Not Available | Positive | 380551 - 382344 | 64984.8 |
| Hth dna-binding protein | KR76_RS01820 | Not Available | Positive | 382341 - 382961 | 22925.4 |
| hypothetical protein | KR76_RS01825 | Not Available | Positive | 382958 - 383548 | 22004.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
