Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | KR76_RS08875 | Not Available | Positive | 1813414 - 1814049 | 22275.4 |
| yidh family protein | KR76_RS08880 | Not Available | Negative | 1814039 - 1814401 | 12718.7 |
| phosphopyruvate hydratase | KR76_RS08885 | Not Available | Positive | 1814517 - 1815794 | 44776.6 |
| ftsb family cell division protein | KR76_RS08890 | Not Available | Positive | 1815824 - 1816429 | 22569.6 |
| duf501 domain-containing protein | KR76_RS08895 | Not Available | Positive | 1816483 - 1816971 | 16990.3 |
| exopolyphosphatase | KR76_RS08900 | Not Available | Positive | 1816964 - 1817890 | 31704.0 |
| uracil-dna glycosylase | KR76_RS08905 | Not Available | Positive | 1817887 - 1818618 | 26339.6 |
| glycine cleavage system protein r | KR76_RS08910 | Not Available | Positive | 1818615 - 1819139 | 17524.0 |
| peptide deformylase | KR76_RS08915 | Not Available | Positive | 1819136 - 1819690 | 19688.4 |
| Trna-leu | Not Available | Not Available | Positive | 1819710 - 1819784 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
