Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feccd family abc transporter permease | KR76_RS08620 | Not Available | Positive | 1759377 - 1760468 | 36821.2 |
| abc transporter substrate-binding protein | KR76_RS08625 | Not Available | Positive | 1760500 - 1761486 | 34593.9 |
| abc transporter atp-binding protein | KR76_RS08630 | Not Available | Positive | 1761483 - 1762265 | 27766.7 |
| class i sam-dependent methyltransferase | KR76_RS08635 | Not Available | Positive | 1762262 - 1762969 | 25475.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | KR76_RS08640 | Not Available | Positive | 1762982 - 1764334 | 47140.6 |
| duf4233 domain-containing protein | KR76_RS08645 | Not Available | Positive | 1764331 - 1764708 | 13244.5 |
| preprotein translocase subunit seca | KR76_RS08650 | Not Available | Positive | 1764776 - 1767664 | 107668.0 |
| hypothetical protein | KR76_RS08655 | Not Available | Negative | 1767803 - 1769008 | 41541.3 |
| rv3235 family protein | KR76_RS28035 | Not Available | Negative | 1769079 - 1769606 | 18924.9 |
| lysm peptidoglycan-binding domain-containing protein | KR76_RS29525 | Not Available | Negative | 1769635 - 1770267 | 21314.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
