Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | KR76_RS08420 | Not Available | Negative | 1716548 - 1717906 | 47206.6 |
| universal stress protein | KR76_RS08425 | Not Available | Negative | 1718016 - 1718507 | 16726.8 |
| aminopeptidase p family protein | KR76_RS08430 | Not Available | Negative | 1718504 - 1719922 | 51483.3 |
| prsw family intramembrane metalloprotease | KR76_RS08435 | Not Available | Positive | 1720017 - 1721138 | 39748.9 |
| dynamin family protein | KR76_RS08440 | Not Available | Positive | 1721135 - 1722889 | 62330.3 |
| abc transporter | KR76_RS30100 | Not Available | Positive | 1722886 - 1724487 | 56436.4 |
| single-stranded dna-binding protein | KR76_RS08450 | Not Available | Positive | 1724692 - 1725114 | 14788.5 |
| energy-dependent translational throttle protein etta | KR76_RS08455 | Not Available | Positive | 1725260 - 1726942 | 62037.5 |
| hnh endonuclease signature motif containing protein | KR76_RS08460 | Not Available | Positive | 1727056 - 1728348 | 46967.4 |
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS08465 | Not Available | Negative | 1728522 - 1729034 | 18824.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
