Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3618 domain-containing protein | KR76_RS08280 | Not Available | Positive | 1689349 - 1689597 | 8996.9 |
| co-chaperone groes | KR76_RS30090 | Not Available | Positive | 1689636 - 1689935 | 10678.7 |
| mfs transporter | KR76_RS30835 | Not Available | Negative | 1690266 - 1691324 | 37083.6 |
| amidase | KR76_RS08295 | Not Available | Negative | 1691321 - 1692796 | 50808.2 |
| pucr family transcriptional regulator | KR76_RS08300 | Not Available | Negative | 1692834 - 1694441 | 56946.4 |
| penicillin acylase family protein | KR76_RS08305 | Not Available | Positive | 1694579 - 1696999 | 86545.5 |
| wyl domain-containing protein | KR76_RS08310 | Not Available | Positive | 1697066 - 1698022 | 34349.1 |
| helix-turn-helix transcriptional regulator | KR76_RS08315 | Not Available | Positive | 1698019 - 1698999 | 35543.1 |
| hypothetical protein | KR76_RS30095 | Not Available | Positive | 1699109 - 1699276 | 5845.99 |
| hnh endonuclease signature motif containing protein | KR76_RS08320 | Not Available | Positive | 1699333 - 1700610 | 46755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
