Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | KR76_RS08180 | Not Available | Negative | 1672236 - 1673303 | 38016.5 |
| glutamate racemase | KR76_RS08185 | Not Available | Positive | 1673385 - 1674218 | 29665.3 |
| mbl fold metallo-hydrolase | KR76_RS08190 | Not Available | Positive | 1674215 - 1675039 | 29774.3 |
| response regulator | KR76_RS08195 | Not Available | Negative | 1675044 - 1675709 | 23591.5 |
| sensor histidine kinase | KR76_RS08200 | Not Available | Negative | 1675706 - 1676905 | 44029.8 |
| abc transporter atp-binding protein | KR76_RS08205 | Not Available | Positive | 1677036 - 1677974 | 32230.0 |
| abc transporter permease | KR76_RS08210 | Not Available | Positive | 1677971 - 1678768 | 28277.3 |
| sgnh/gdsl hydrolase family protein | KR76_RS08215 | Not Available | Positive | 1678855 - 1679613 | 27595.9 |
| ribonuclease ph | KR76_RS08220 | Not Available | Positive | 1679635 - 1680342 | 24789.4 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | KR76_RS08225 | Not Available | Positive | 1680339 - 1680941 | 21445.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
